Miyakogusa Predicted Gene

Lj5g3v0998790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MU73_SOYBN 1356 83.2 91.1 (tr|K7MU73) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G03100.1 984 67.8 79.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:744026-746407 REVERSE LENGTH=793
Medicago Medtr4g081540.1 1316 81.4 89.1 | PPR containing plant protein | HC | chr4:31641729-31645378 | 20130731
Soybean Glyma18g46360.1 1231 83.8 91.1  
LJGI gnl|LJGI|TC74752 858 97.5 97.5 similar to UniRef100_A7PUD4 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0998790.1 length: 776 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1 485-510
552-579
HMMPfam PF13041 PPR_2 5.9e-09 624-667
HMMPfam PF13812 PPR_3 0.059 314-338
HMMTigr TIGR00756 PPR: 8.4e-06 516-548
624-656
ProfileScan PS51375 PPR 6.062 150-184
238-272
311-345
478-512
513-547
548-582
620-654
655-690
696-730
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-50 35-738
HMMPanther PTHR24015:SF0 SUBFAMILY 1.4e-50 35-738
Seg seg seg NA 688-692
Wolf-PSORT
Lj5g3v0998790.1	chlo 11, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0998790.1 Not targeted -44.403 -3.432 -6.577 63.27% -34.395