Miyakogusa Predicted Gene

Lj5g3v0975690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L835_SOYBN 838 79.4 86.6 (tr|I1L835) Mitochondrial Rho GTPase OS=Glycine max PE=3 SV=2
TAIR_pep AT3G63150.1 584 55.1 73.4 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | chr3:23329200-23332692 REVERSE LENGTH=643
Medicago Medtr7g094810.1 781 73.3 84.9 | Rho GTPase | HC | chr7:37834516-37844546 | 20130731
Soybean Glyma10g03170.1 838 79.4 86.6  
LJGI gnl|LJGI|CB828402 829 99.8 99.8 weakly similar to UniRef100_A7PSB4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0975690.1 length: 496 aa.
IPR011992 EF-hand-like domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 0.00013 172-233
IPR013566 EF hand associated, type-1
HMMPfam PF08355 EF_assoc_1 1.8e-24 206-276
IPR013567 EF hand associated, type-2
HMMPfam PF08356 EF_assoc_2 2.1e-28 84-171
IPR013684 Mitochondrial Rho-like
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMPfam PF08477 Miro 6.3e-11 283-401
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 63-75
IPR020860 MIRO
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
ProfileScan PS51423 MIRO 12.360 274-496
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-23 276-455
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.5e-17 271-463
HMMPanther PTHR24072 FAMILY 2.5e-248 1-456
HMMPanther PTHR24072:SF73 SUBFAMILY 2.5e-248 1-456
Seg seg seg NA 258-271
superfamily SSF47473 EF-hand 1.9e-13 35-234
Wolf-PSORT
Lj5g3v0975690.1	chlo 5, E.R. 3.5, E.R._plas 3.5, plas 2.5, chlo_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0975690.1