Miyakogusa Predicted Gene
- Lj5g3v0962840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L826_SOYBN |
410 |
80.8 |
88.6 |
(tr|I1L826) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G03250.1 |
314 |
64.2 |
78.9 |
| Symbols: | unknown protein; Has 89 Blast hits to 89 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:793576-795159 REVERSE LENGTH=245 |
| Medicago |
Medtr1g072510.1 |
381 |
79.7 |
87.8 |
| R3H-associated amine-terminal domain protein | HC | chr1:32173770-32170370 | 20130731 |
| Soybean |
Glyma10g03070.1 |
410 |
80.8 |
88.6 |
|
| LJGI |
gnl|LJGI|TC76170 |
1467 |
99.9 |
99.9 |
similar to UniRef100_A7PU84 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0962840.1 |
length: 246 aa. |
| IPR025952 |
R3H-associated N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF13902 |
R3H-assoc |
3.5e-43 |
26-171 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
215-223 |
| superfamily |
SSF82708 |
R3H |
2.6e-09 |
127-202 |
- Wolf-PSORT
Lj5g3v0962840.1 cyto 7, nucl 3, plas 2, chlo 1, extr 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0962840.1 |
|