Miyakogusa Predicted Gene
- Lj5g3v0962650.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IEG0_MEDTR |
687 |
84.5 |
91.9 |
(tr|G7IEG0) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g072550 PE=4 SV=1 |
| TAIR_pep |
AT3G63090.1 |
560 |
71.8 |
86.6 |
| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr3:23313617-23314831 FORWARD LENGTH=404 |
| Medicago |
Medtr1g072550.1 |
687 |
84.5 |
91.9 |
| plant organelle RNA recognition domain protein | HC | chr1:32201119-32198282 | 20130731 |
| Soybean |
Glyma10g03040.1 |
652 |
81.7 |
89.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0962650.1 |
length: 393 aa. |
| IPR021099 |
Plant organelle RNA recognition domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF11955 |
PORR |
2.9e-105 |
35-370 |
| no_ID |
|
| HMMPanther |
PTHR31476 |
FAMILY |
7e-123 |
26-388 |
| HMMPanther |
PTHR31476:SF0 |
SUBFAMILY |
7e-123 |
26-388 |
| Seg |
seg |
seg |
NA |
14-22 |
- Wolf-PSORT
Lj5g3v0962650.1 chlo 8.5, chlo_mito 5.5, mito 1.5, nucl 1, cyto 1, extr 1, pero 1, cyto_nucl 1, cyto_pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0962650.1 |
|