Miyakogusa Predicted Gene

Lj5g3v0942160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NHZ1_SOYBN 424 70.8 80.4 (tr|I1NHZ1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G04530.1 136 36.6 51.5 | Symbols: TPR4 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1234456-1235895 REVERSE LENGTH=310
Medicago Medtr1g073230.1 408 67.7 78.2 | O-linked N-acetylglucosamine transferase, ogt protein, putative | HC | chr1:32490728-32494156 | 20130731
Soybean Glyma20g34190.1 423 70.8 80.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0942160.1 length: 301 aa.
IPR003107 RNA-processing protein, HAT helix
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006396 RNA processing    
HMMSmart SM00386 HAT 2.7e+02 34-66
68-100
103-135
193-225
228-260
263-295
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2e-25 194-288
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 12.663 32-122
196-282
no_ID  
HMMPanther PTHR26312 FAMILY 1.9e-59 35-300
HMMPanther PTHR26312:SF53 SUBFAMILY 1.9e-59 35-300
HMMPfam PF13414 TPR_11 3.2e-08 55-120
212-280
superfamily SSF48452 TPR-like 8.2e-15 51-288
Wolf-PSORT
Lj5g3v0942160.1	cyto 5.5, nucl 4, cyto_E.R. 3.5, plas 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0942160.1