Miyakogusa Predicted Gene

Lj5g3v0890580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JG82_SOYBN 1189 92.4 96.4 (tr|I1JG82) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G13650.1 1131 85.3 91.5 | Symbols: | elongation factor family protein | chr5:4397821-4402364 FORWARD LENGTH=675
Medicago Medtr1g052535.1 1165 86.8 93.4 | GTP-binding protein TypA/BipA | HC | chr1:21400938-21392688 | 20130731
Soybean Glyma02g31480.1 1189 92.4 96.4  
LJGI gnl|LJGI|TC70438 1875 100.0 100.0 homologue to UniRef100_A7PWD3 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0890580.1 length: 674 aa.
IPR000640 Translation elongation factor EFG, V domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.70.240 no description 2.1e-24 479-559
HMMPfam PF00679 EFG_C 2.2e-18 473-559
HMMSmart SM00838 Elongation 0.00024 472-561
IPR000795 Elongation factor, GTP-binding domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 3.1e-13 84-97
128-136
148-158
200-209
HMMPfam PF00009 GTP_EFTU 5.1e-51 82-272
PatternScan PS00301 EFACTOR_GTP NA 121-136
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 6e-08 296-366
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.7e-21 83-231
IPR006298 GTP-binding protein TypA
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
HMMPanther PTHR23115:SF14 GTP-BINDING 9.5e-300 65-663
HMMTigr TIGR01394 TypA_BipA: 2.9e-275 82-669
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 4.9e-28 228-377
IPR009022 Elongation factor G, III-V domain
superfamily SSF54980 EF-G 5.7e-18 475-591
379-464
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.4e-63 77-297
no_ID  
Gene3D G3DSA:2.40.30.10 no description 1.8e-22 285-380
Gene3D G3DSA:2.40.50.250 no description 5.8e-33 560-653
Gene3D G3DSA:3.30.70.870 no description 1.3e-32 381-478
Gene3D G3DSA:3.40.50.300 no description 1.1e-58 75-284
HMMPanther PTHR23115 TRANSLATION 9.5e-300 65-663
Seg seg seg NA 7-25
Wolf-PSORT
Lj5g3v0890580.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0890580.1