Miyakogusa Predicted Gene

Lj5g3v0875570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LA46_SOYBN 358 92.3 97.3 (tr|I1LA46) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G10300.3 329 82.5 95.1 | Symbols: | Calcium-binding EF-hand family protein | chr3:3186436-3188071 FORWARD LENGTH=335
Medicago Medtr1g051895.1 372 95.6 98.9 | calcium-binding EF-hand protein | HC | chr1:20793375-20787827 | 20130731
Soybean Glyma10g16040.1 358 92.3 97.3  
LJGI gnl|LJGI|TC60082 1766 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0875570.1 length: 296 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13202 EF_hand_3 0.00019 130-154
HMMPfam PF13405 EF_hand_4 1.9e-06 196-224
HMMSmart SM00054 EF-hand, 0.0025 129-157
195-223
ProfileScan PS50222 EF_HAND_2 14.179 125-160
191-226
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.9e-37 130-290
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 138-150
204-216
no_ID  
HMMPanther PTHR10183 CALPAIN 1e-145 48-295
HMMPanther PTHR10183:SF16 CALCIUM-BINDING 1e-145 48-295
Seg seg seg NA 8-88
92-113
superfamily SSF47473 EF-hand 2.3e-38 109-292
Wolf-PSORT
Lj5g3v0875570.1	nucl 6, E.R._plas 3, plas 2.5, E.R. 2.5, chlo 1, mito 1, extr 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0875570.1