Miyakogusa Predicted Gene

Lj5g3v0845630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KG49_SOYBN 1169 66.2 73.6 (tr|K7KG49) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1
TAIR_pep AT5G22030.1 718 44.3 57.7 | Symbols: UBP8 | ubiquitin-specific protease 8 | chr5:7290155-7296344 REVERSE LENGTH=913
Medicago Medtr7g106570.1 1108 65.7 75.1 | ubiquitin carboxyl-terminal hydrolase | HC | chr7:43382337-43390245 | 20130731
Soybean Glyma03g36200.1 868 73.9 82.1  
LJGI gnl|LJGI|AV780533 938 97.6 97.6  
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0845630.1 length: 930 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 7.2e-84 329-927
ProfileScan PS50235 UCH_2_3 33.962 331-930
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 332-347
PatternScan PS00973 UCH_2_2 NA 873-890
no_ID  
HMMPanther PTHR24006 FAMILY 8.6e-233 5-930
HMMPanther PTHR24006:SF24 SUBFAMILY 8.6e-233 5-930
Seg seg seg NA 3-16
51-82
97-110
120-139
292-297
327-339
511-524
662-674
superfamily SSF54001 Cysteine 6.2e-106 322-930
Wolf-PSORT
Lj5g3v0845630.1	chlo 7.5, chlo_mito 6.83333, mito 5, cyto_mito 3.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0845630.1