database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | B7FI20_MEDTR | 441 | 75.8 | 83.9 | (tr|B7FI20) Syntaxin-121 OS=Medicago truncatula GN=MTR_1g056550 PE=2 SV=1 |
TAIR_pep | AT3G11820.1 | 352 | 65.6 | 76.8 | | Symbols: SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1 | syntaxin of plants 121 | chr3:3729540-3730868 REVERSE LENGTH=346 |
Medicago | Medtr1g056550.1 | 441 | 75.8 | 83.9 | | syntaxin of plants 122 protein | HC | chr1:24712400-24709062 | 20130731 |
Soybean | Glyma02g35210.1 | 431 | 76.1 | 83.9 | |
LJGI | gnl|LJGI|TC67951 | 1808 | 100.0 | 100.0 | similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-related protein Nt-syr1; n=1; Nicotiana tabacum|Rep: Syntaxin-related protein Nt-syr1 - Nicotiana tabacum (Common tobacco), partial (91%) |
Lj5g3v0841020.1 | length: 302 aa. | |||
IPR000727 | Target SNARE coiled-coil domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF05739 | SNARE | 2.1e-21 | 212-274 |
HMMSmart | SM00397 | Helical | 2e-18 | 202-269 |
ProfileScan | PS50192 | T_SNARE | 18.466 | 207-269 |
IPR006011 | Syntaxin, N-terminal | |||
Cellular Component | GO:0016020 | membrane | ||
HMMPfam | PF00804 | Syntaxin | 1e-12 | 37-143 |
HMMSmart | SM00503 | Syntaxin | 2.1e-39 | 32-158 |
IPR006012 | Syntaxin/epimorphin, conserved site | |||
Molecular Function | GO:0005484 | SNAP receptor activity | ||
Biological Process | GO:0006886 | intracellular protein transport | ||
Cellular Component | GO:0016020 | membrane | ||
PatternScan | PS00914 | SYNTAXIN | NA | 213-252 |
IPR010989 | t-SNARE | |||
Cellular Component | GO:0016020 | membrane | ||
Biological Process | GO:0016192 | vesicle-mediated transport | ||
superfamily | SSF47661 | t-snare | 1.1e-47 | 34-263 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 37-72 |
Gene3D | G3DSA:1.20.58.70 | no description | 7.8e-47 | 36-262 |
HMMPanther | PTHR19957 | SYNTAXIN | 6.1e-162 | 5-301 |
HMMPanther | PTHR19957:SF26 | SYNTAXIN, | 6.1e-162 | 5-301 |
Seg | seg | seg | NA | 89-105 121-134 282-300 |
Lj5g3v0841020.1 golg 5, chlo 2, plas 2, vacu 2, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, chlo_mito 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v0841020.1 |