Miyakogusa Predicted Gene

Lj5g3v0841000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGG9_SOYBN 436 70.6 77.1 (tr|I1JGG9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G11820.1 392 71.6 79.9 | Symbols: SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1 | syntaxin of plants 121 | chr3:3729540-3730868 REVERSE LENGTH=346
Medicago Medtr1g056560.1 422 70.0 80.8 | syntaxin of plants 122 protein | HC | chr1:24716837-24713909 | 20130731
Soybean Glyma02g35230.1 436 70.6 77.1  
LJGI gnl|LJGI|TC72668 1600 100.0 100.0 similar to UniRef100_A7QQV5 Cluster: Chromosome undetermined scaffold_145, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_145, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0841000.1 length: 338 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 9.3e-20 219-281
HMMSmart SM00397 Helical 1.5e-13 209-276
ProfileScan PS50192 T_SNARE 17.194 214-276
IPR006011 Syntaxin, N-terminal
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 1.2e-12 44-150
HMMSmart SM00503 Syntaxin 3.2e-41 39-165
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 1.2e-44 41-269
no_ID  
Coil coil coiled-coil NA 51-75
Gene3D G3DSA:1.20.5.110 no description 1e-29 211-306
Gene3D G3DSA:1.20.58.70 no description 2.2e-16 43-172
HMMPanther PTHR19957 SYNTAXIN 1.2e-172 9-338
HMMPanther PTHR19957:SF26 SYNTAXIN, 1.2e-172 9-338
Seg seg seg NA 5-15
33-40
97-112
291-306
311-338
Wolf-PSORT
Lj5g3v0841000.1	chlo 4, golg 4, plas 2, chlo_mito 2, nucl 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, cysk_plas 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0841000.1