| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1L9L1_SOYBN | 1563 | 82.7 | 87.7 | (tr|I1L9L1) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT2G35920.1 | 1338 | 70.0 | 82.6 | | Symbols: | RNA helicase family protein | chr2:15075674-15080506 FORWARD LENGTH=995 |
| Medicago | Medtr1g056490.1 | 1519 | 80.0 | 85.1 | | ATP-dependent RNA helicase | HC | chr1:24729204-24739293 | 20130731 |
| Soybean | Glyma10g10180.1 | 1542 | 80.2 | 85.1 | |
| LJGI | gnl|LJGI|TC69175 | 313 | 98.8 | 98.8 | similar to UniRef100_A7QQX0 Cluster: Chromosome undetermined scaffold_145, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_145, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
| Lj5g3v0840940.1 | length: 921 aa. | |||
| IPR001650 | Helicase, C-terminal | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 3.1e-14 | 459-546 |
| HMMSmart | SM00490 | helicase | 5.6e-20 | 438-547 |
| ProfileScan | PS51194 | HELICASE_CTER | 16.509 | 413-587 |
| IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| PatternScan | PS00690 | DEAH_ATP_HELICASE | NA | 272-281 |
| IPR007502 | Helicase-associated domain | |||
| Molecular Function | GO:0004386 | helicase activity | ||
| HMMPfam | PF04408 | HA2 | 1.5e-24 | 609-700 |
| HMMSmart | SM00847 | Helicase | 5.7e-33 | 609-700 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| HMMPfam | PF00270 | DEAD | 1.7e-05 | 160-315 |
| IPR011709 | Domain of unknown function DUF1605 | |||
| HMMPfam | PF07717 | OB_NTP_bind | 3.9e-17 | 738-849 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 2.3e-27 | 151-344 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 18.808 | 163-330 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 6.1e-77 | 147-736 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 871-892 |
| Gene3D | G3DSA:3.40.50.300 | no description | 1.2e-10 | 152-313 421-573 |
| HMMPanther | PTHR18934 | ATP-DEPENDENT | 0 | 66-896 |
| HMMPanther | PTHR18934:SF68 | SUBFAMILY | 0 | 66-896 |
| Seg | seg | seg | NA | 121-136 211-224 289-306 363-375 536-550 |
Lj5g3v0840940.1 nucl 9, cyto 3, chlo 1, cysk 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v0840940.1 | Not targeted | -63.478 | -1.648 | -9.068 | 91.89% | -52.761 |