Miyakogusa Predicted Gene

Lj5g3v0803050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGL8_SOYBN 1726 89.2 92.8 (tr|I1JGL8) Putative UDP-N-acetylglucosamin OS=Glycine max GN=SPY1 PE=2 SV=1
TAIR_pep AT3G11540.1 1493 78.2 86.9 | Symbols: SPY | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:3632842-3637547 FORWARD LENGTH=914
Medicago Medtr1g059610.1 1691 88.1 91.6 | O-linked N-acetylglucosamine transferase, putative | HC | chr1:25917520-25902172 | 20130731
Soybean Glyma02g36210.2 1726 89.2 92.8  
LJGI gnl|LJGI|TC82591 1707 99.5 99.5 similar to UniRef100_Q3EB84 Cluster: Uncharacterized protein At3g11540.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At3g11540.2 - Arabidopsis thaliana (Mouse-ear cress), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0803050.1 length: 929 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 9.7e-05 82-114
115-148
IPR006597 Sel1-like
HMMPfam PF08238 Sel1 4.1 299-325
HMMSmart SM00671 Sel1-like 1.4e+02 190-221
224-255
299-330
333-364
401-432
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.7e-41 53-272
278-444
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 81.111 47-434
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF13181 TPR_8 7.8e-08 401-433
HMMSmart SM00028 Tetratricopeptide 2.9e-08 47-80
81-114
115-148
156-189
190-223
224-257
265-298
299-332
333-366
367-400
401-434
ProfileScan PS50005 TPR 13.187 81-114
115-148
156-189
190-223
224-257
265-298
299-332
333-366
367-400
401-434
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 0 50-705
HMMPanther PTHR23083:SF159TPR DOMAIN 0 50-705
HMMPfam PF13414 TPR_11 4.6e-13 333-398
HMMPfam PF13424 TPR_12 4e-10 187-253
HMMPfam PF13844 Glyco_transf_41 1.4e-27 487-637
656-845
Seg seg seg NA 23-39
713-728
superfamily SSF48452 TPR-like 7.6e-40 275-803
29-272
Wolf-PSORT
Lj5g3v0803050.1	cyto 7, chlo 4, nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0803050.1