Miyakogusa Predicted Gene

Lj5g3v0747120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K8W7_SOYBN 878 81.1 85.1 (tr|K7K8W7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G42520.1 797 75.3 84.5 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17705382-17708744 FORWARD LENGTH=633
Medicago Medtr1g054630.1 875 78.9 83.9 | DEAD-box ATP-dependent RNA helicase-like protein | HC | chr1:23756195-23750953 | 20130731
Soybean Glyma02g26630.1 878 81.1 85.1  
LJGI gnl|LJGI|TC77580 1398 100.0 100.0 similar to UniRef100_A7PW15 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0747120.1 length: 597 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 3e-27 431-503
HMMSmart SM00490 helicase 1.4e-35 422-503
ProfileScan PS51194 HELICASE_CTER 22.619 391-542
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 6.2e-47 173-353
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 6.4e-59 168-379
ProfileScan PS51192 HELICASE_ATP_BIND_1 29.591 180-364
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.185 149-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.9e-75 226-526
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.9e-52 131-377
378-538
HMMPanther PTHR24031 FAMILY 0 11-597
HMMPanther PTHR24031:SF9 HELICASE 0 11-597
Seg seg seg NA 10-28
60-70
94-103
546-561
577-597
Wolf-PSORT
Lj5g3v0747120.1	nucl 5, mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0747120.1