Miyakogusa Predicted Gene

Lj5g3v0747050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SB53_LOTJA 671 96.0 96.0 (tr|I3SB53) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G58530.1 447 64.7 78.6 | Symbols: | RNI-like superfamily protein | chr3:21645759-21648219 FORWARD LENGTH=353
Medicago Medtr1g054625.1 581 83.1 89.5 | F-box/LRR protein | HC | chr1:23749689-23744064 | 20130731
Soybean Glyma09g15970.1 580 82.5 88.8  
LJGI gnl|LJGI|TC76846 2097 99.7 99.7 similar to UniRef100_A7PW12 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0747050.1 length: 357 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 21 114-139
140-165
166-191
192-217
218-243
268-293
294-319
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.9e-44 34-288
HMMPanther PTHR23125 F-BOX/LEUCINE 3.3e-128 9-356
HMMPanther PTHR23125:SF58 SUBFAMILY 3.3e-128 9-356
HMMPfam PF13516 LRR_6 1.8 114-136
166-187
195-214
Seg seg seg NA 2-11
39-49
superfamily SSF52047 RNI-like 6.2e-42 80-348
Wolf-PSORT
Lj5g3v0747050.1	cyto 7, nucl 5, chlo 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0747050.1