Miyakogusa Predicted Gene
- Lj5g3v0707740.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L972_SOYBN |
351 |
84.0 |
94.8 |
(tr|I1L972) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G03760.1 |
320 |
77.3 |
91.9 |
| Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533 |
| Medicago |
Medtr7g103590.1 |
343 |
84.3 |
94.1 |
| cellulose synthase-like protein A1 | HC | chr7:41916018-41921854 | 20130731 |
| Soybean |
Glyma10g07560.1 |
351 |
84.0 |
94.8 |
|
| LJGI |
gnl|LJGI|FS343028 |
914 |
100.0 |
100.0 |
similar to UniRef100_A3QT94 Cluster: Cellulose synthase-like A1; n=1; Pinus taeda|Rep: Cellulose synthase-like A1 - Pinus taeda (Loblolly pine), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0707740.1 |
length: 192 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.90.550.10 |
no description |
4.1e-07 |
85-192 |
| HMMPanther |
PTHR32044 |
FAMILY |
9.5e-109 |
9-192 |
| HMMPanther |
PTHR32044:SF0 |
SUBFAMILY |
9.5e-109 |
9-192 |
| HMMPfam |
PF13641 |
Glyco_tranf_2_3 |
2.3e-11 |
86-192 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
1.4e-18 |
82-192 |
- Wolf-PSORT
Lj5g3v0707740.1 cyto 4, plas 4, cyto_plas 4, chlo 2, cyto_nucl 2, nucl_plas 2, cyto_pero 2, cysk_plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0707740.1 |
|