Miyakogusa Predicted Gene

Lj5g3v0706670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2A1E8_LOTJA 187 96.8 96.8 (tr|A2A1E8) Nucleoporin OS=Lotus japonicus GN=NUP85 PE=2 SV=1
TAIR_pep AT4G32910.1 132 65.2 82.6 | Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15881364-15885210 FORWARD LENGTH=716
Medicago Medtr1g006690.1 169 86.0 91.4 | Nup85 nucleoporin protein | HC | chr1:110219-98846 | 20130731
Soybean Glyma17g27490.1 169 87.1 90.3  
LJGI gnl|LJGI|TC58967 589 100.0 100.0 homologue to UniRef100_A2A1E8 Cluster: Nucleoporin; n=1; Lotus japonicus|Rep: Nucleoporin - Lotus japonicus, partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0706670.1 length: 97 aa.
IPR011502 Nucleoporin Nup85-like
method AccNumber shortName E-value location
HMMPfam PF07575 Nucleopor_Nup85 5.4e-26 2-94
no_ID  
HMMPanther PTHR13373 FROUNT 5.4e-42 1-93
HMMPanther PTHR13373:SF15 SUBFAMILY 5.4e-42 1-93
Wolf-PSORT
Lj5g3v0706670.1	cyto 8, chlo 2, extr 2, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0706670.1