Miyakogusa Predicted Gene
- Lj5g3v0670650.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q9STA5_MEDTR |
596 |
73.4 |
85.9 |
(tr|Q9STA5) Nodulin 6 OS=Medicago truncatula GN=MtN6 PE=4 SV=1 |
| TAIR_pep |
AT3G53180.1 |
485 |
59.9 |
76.6 |
| Symbols: | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases | chr3:19707068-19711188 FORWARD LENGTH=852 |
| Medicago |
Medtr1g062710.1 |
596 |
73.4 |
85.9 |
| nodulin/glutamate-ammonia ligase-like protein | HC | chr1:27448210-27451293 | 20130731 |
| Soybean |
Glyma10g06820.1 |
575 |
72.4 |
85.9 |
|
| LJGI |
gnl|LJGI|TC64661 |
2155 |
99.9 |
99.9 |
similar to UniRef100_Q9STA5 Cluster: Nodulin 6; n=2; Medicago truncatula|Rep: Nodulin 6 - Medicago truncatula (Barrel medic), partial (75%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0670650.1 |
length: 420 aa. |
| IPR006992 |
Amidohydrolase 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF04909 |
Amidohydro_2 |
1.7e-25 |
241-418 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.20.140 |
no description |
1.8e-110 |
39-418 |
| HMMPanther |
PTHR20852 |
GLUTAMINE |
1.7e-106 |
238-420 |
| HMMPanther |
PTHR20852:SF8 |
NODULIN |
1.7e-106 |
238-420 |
| Seg |
seg |
seg |
NA |
8-23 |
| superfamily |
SSF51556 |
Metallo-dependent |
8e-11 |
249-419 |
- Wolf-PSORT
Lj5g3v0670650.1 vacu 7, nucl 2, chlo 1, cyto 1, plas 1, extr 1, E.R. 1, cysk_nucl 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0670650.1 |
|