Miyakogusa Predicted Gene

Lj5g3v0670590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZA9_SOYBN 381 92.0 97.0 (tr|I1LZA9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G03530.1 357 82.9 91.5 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, RABC2A | RAB GTPase homolog C2A | chr5:885741-887061 REVERSE LENGTH=210
Medicago Medtr1g062760.1 369 89.0 95.0 | RAB GTPase-like protein A5B | HC | chr1:27495849-27498608 | 20130731
Soybean Glyma10g06780.1 395 92.0 96.7  
LJGI gnl|LJGI|TC67644 545 86.4 86.4 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus japonicus|Rep: RAB1X - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0670590.1 length: 211 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 6.1e-36 15-36
37-53
55-77
119-132
154-176
HMMPfam PF00071 Ras 1.1e-54 16-177
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 0.00036 20-207
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 9.2e-14 17-179
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 7.2e-96 15-179
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 5.9e-30 15-171
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1e-30 12-179
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4e-62 10-210
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.2e-66 7-210
HMMPanther PTHR24073 FAMILY 1.2e-120 1-211
HMMPanther PTHR24073:SF285SUBFAMILY NOT 1.2e-120 1-211
ProfileScan PS51419 RAB 31.861 10-211
Wolf-PSORT
Lj5g3v0670590.1	nucl 4, cyto 4, cyto_nucl 4, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0670590.1