Miyakogusa Predicted Gene

Lj5g3v0658330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NCV6_SOYBN 2045 87.8 91.9 (tr|I1NCV6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G38770.1 1737 75.9 85.8 | Symbols: EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16203185-16210253 REVERSE LENGTH=1509
Medicago Medtr1g038815.1 2020 85.2 89.4 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:14386619-14375144 | 20130731
Soybean Glyma20g00260.1 2046 87.8 91.9  
LJGI gnl|LJGI|GO011529 743 99.2 99.2 similar to UniRef100_A7QA16 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0658330.1 length: 1128 aa.
IPR024860 Intron-binding protein, aquarius
method AccNumber shortName E-value location
Biological Process GO:0000398 mRNA splicing, via spliceosome    
Cellular Component GO:0005681 spliceosomal complex    
Molecular Function GO:0097157 pre-mRNA intronic binding    
HMMPanther PTHR10887:SF5 INTRON-BINDING 0 1-1038
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.3e-48 467-976
no_ID  
Gene3D G3DSA:3.40.50.300 no description 0.00037 726-825
918-988
HMMPanther PTHR10887 DNA2/NAM7 0 1-1038
HMMPfam PF13086 AAA_11 1.7e-30 479-778
HMMPfam PF13087 AAA_12 7.4e-25 787-978
Seg seg seg NA 456-470
577-594
Wolf-PSORT
Lj5g3v0658330.1	nucl 4, mito 4, chlo 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0658330.1