Miyakogusa Predicted Gene

Lj5g3v0626740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JPL1_SOYBN 528 57.7 65.4 (tr|I1JPL1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G03150.1 328 59.2 66.2 | Symbols: JKD | C2H2-like zinc finger protein | chr5:745849-748678 FORWARD LENGTH=503
Medicago Medtr4g059870.1 317 42.5 56.1 | C2H2 and C2HC zinc finger protein, putative | HC | chr4:22086566-22083892 | 20130731
Soybean Glyma03g33700.1 528 57.7 65.4  
LJGI gnl|LJGI|AV772572 710 98.4 98.4 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family protein, expressed; n=1; Oryza sativa Japonica Group|Rep: Zinc finger, C2H2 type family protein, expressed - Oryza sativa subsp. japonica (Rice), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0626740.1 length: 488 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 69-89
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 67-89
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00013 66-89
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.3e+02 67-89
108-138
143-163
IPR022755 Zinc finger, double-stranded RNA binding
HMMPfam PF12171 zf-C2H2_jaz 6.1e-05 66-89
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 2.1e-131 38-380
HMMPanther PTHR10593:SF17 SUBFAMILY 2.1e-131 38-380
Seg seg seg NA 24-40
140-151
378-396
425-437
superfamily SSF57667 C2H2 0.0002 138-181
66-91
Wolf-PSORT
Lj5g3v0626740.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0626740.1