Miyakogusa Predicted Gene
- Lj5g3v0626510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LZ20_SOYBN |
355 |
75.1 |
87.1 |
(tr|I1LZ20) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G03080.1 |
312 |
68.5 |
82.4 |
| Symbols: | Phosphatidic acid phosphatase (PAP2) family protein | chr5:721976-722656 FORWARD LENGTH=226 |
| Medicago |
Medtr1g066770.1 |
337 |
73.3 |
86.4 |
| phosphatidic acid phosphatase (PAP2) family protein | HC | chr1:28692932-28697005 | 20130731 |
| Soybean |
Glyma13g20100.1 |
355 |
75.1 |
87.1 |
|
| LJGI |
gnl|LJGI|TC57668 |
1340 |
100.0 |
100.0 |
similar to UniRef100_A7PT01 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0626510.1 |
length: 224 aa. |
| IPR000326 |
Phosphatidic acid phosphatase type 2/haloperoxidase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF01569 |
PAP2 |
3.3e-20 |
53-171 |
| HMMSmart |
SM00014 |
Acid |
0.0051 |
53-167 |
| superfamily |
SSF48317 |
Acid |
4.8e-16 |
8-171 |
| IPR016118 |
Phosphatidic acid phosphatase/chloroperoxidase, N-terminal |
| Gene3D |
G3DSA:1.20.144.10 |
no description |
1.3e-12 |
24-169 |
| no_ID |
|
| HMMPanther |
PTHR11247 |
PALMITOYL-PROTEIN |
2.2e-118 |
6-218 |
| HMMPanther |
PTHR11247:SF14 |
SUBFAMILY |
2.2e-118 |
6-218 |
- Wolf-PSORT
Lj5g3v0626510.1 plas 6.5, cyto_plas 4, E.R. 3, mito 2, chlo 1, pero 1, cyto_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0626510.1 |
|