| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1LYZ9_SOYBN | 447 | 79.4 | 84.1 | (tr|I1LYZ9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT2G20280.1 | 395 | 72.8 | 79.6 | | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:8740054-8742349 REVERSE LENGTH=371 |
| Medicago | Medtr1g067020.2 | 452 | 74.2 | 80.2 | | zinc finger (CCCH-type) family protein | HC | chr1:28837991-28833208 | 20130731 |
| Soybean | Glyma13g19900.1 | 447 | 79.4 | 84.1 | |
| LJGI | gnl|LJGI|TC60111 | 1784 | 97.5 | 97.5 | similar to UniRef100_A7PIB7 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%) |
| Lj5g3v0615780.1 | length: 324 aa. | |||
| IPR000571 | Zinc finger, CCCH-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00356 | zinc | 2.7 | 86-112 159-194 |
| ProfileScan | PS50103 | ZF_C3H1 | 10.925 | 86-113 157-195 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 51-72 207-228 245-266 |
| HMMPanther | PTHR12681 | ZINC | 1.2e-146 | 2-303 |
| HMMPanther | PTHR12681:SF0 | SUBFAMILY | 1.2e-146 | 2-303 |
| Seg | seg | seg | NA | 4-20 53-67 210-222 300-324 |
| superfamily | SSF90229 | CCCH | 1.3e-06 | 84-112 |
Lj5g3v0615780.1 nucl 9, mito 3, chlo 1, plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v0615780.1 | Not targeted | -65.870 | 0 | -13.944 | 93.65% | -51.926 |