Miyakogusa Predicted Gene

Lj5g3v0615470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYY2_SOYBN 843 73.0 83.7 (tr|I1LYY2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G37310.1 642 57.3 72.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:15665102-15667075 REVERSE LENGTH=657
Medicago Medtr1g067280.1 838 72.3 82.6 | PPR containing plant-like protein | HC | chr1:28986458-28983697 | 20130731
Soybean Glyma13g19780.1 829 73.1 83.8  
LJGI gnl|LJGI|TC72802 331 90.6 90.6 weakly similar to UniRef100_A7PSU7 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0615470.1 length: 558 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0038 71-96
172-198
201-230
305-330
407-429
472-500
HMMPfam PF13041 PPR_2 1e-09 97-144
233-269
332-378
HMMTigr TIGR00756 PPR: 3.1e-05 71-97
99-133
172-198
201-227
233-266
333-366
368-401
ProfileScan PS51375 PPR 8.484 1-28
97-131
66-96
168-202
133-167
230-264
331-365
300-330
366-401
402-432
468-502
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.1e-05 464-494
no_ID  
HMMPanther PTHR24015 FAMILY 3.7e-257 1-557
HMMPanther PTHR24015:SF38 PENTATRICOPEPTIDE 3.7e-257 1-557
Wolf-PSORT
Lj5g3v0615470.1	chlo 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0615470.1