database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I3SBM4_LOTJA | 335 | 90.3 | 90.3 | (tr|I3SBM4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep | AT3G53610.3 | 316 | 83.8 | 88.6 | | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216 |
Medicago | Medtr1g068730.1 | 329 | 87.6 | 89.7 | | RAB GTPase-like protein A5B | HC | chr1:29344444-29337634 | 20130731 |
Soybean | Glyma02g10450.1 | 327 | 86.5 | 89.7 | |
LJGI | gnl|LJGI|TC60324 | 1296 | 100.0 | 100.0 | homologue to UniRef100_Q41024 Cluster: Small GTP-binding protein; n=1; Pisum sativum|Rep: Small GTP-binding protein - Pisum sativum (Garden pea), complete |
Lj5g3v0614770.1 | length: 216 aa. | |||
IPR001806 | Small GTPase superfamily | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005525 | GTP binding | ||
Biological Process | GO:0007264 | small GTPase mediated signal transduction | ||
FPrintScan | PR00449 | RASTRNSFRMNG | 1.7e-46 | 16-37 39-55 57-79 119-132 155-177 |
HMMPfam | PF00071 | Ras | 2e-66 | 17-178 |
IPR002041 | Ran GTPase | |||
Molecular Function | GO:0003924 | GTPase activity | ||
Molecular Function | GO:0005525 | GTP binding | ||
Biological Process | GO:0006184 | GTP catabolic process | ||
Biological Process | GO:0006886 | intracellular protein transport | ||
Biological Process | GO:0006913 | nucleocytoplasmic transport | ||
Biological Process | GO:0007165 | signal transduction | ||
HMMSmart | SM00176 | Ran | 1.9e-07 | 21-215 |
IPR003578 | Small GTPase superfamily, Rho type | |||
Molecular Function | GO:0005525 | GTP binding | ||
Cellular Component | GO:0005622 | intracellular | ||
Biological Process | GO:0007264 | small GTPase mediated signal transduction | ||
HMMSmart | SM00174 | Rho | 4e-14 | 18-180 |
IPR003579 | Small GTPase superfamily, Rab type | |||
Molecular Function | GO:0005525 | GTP binding | ||
Biological Process | GO:0007264 | small GTPase mediated signal transduction | ||
Biological Process | GO:0015031 | protein transport | ||
HMMSmart | SM00175 | Rab | 7.6e-107 | 16-180 |
IPR005225 | Small GTP-binding protein domain | |||
Molecular Function | GO:0005525 | GTP binding | ||
HMMTigr | TIGR00231 | small_GTP: | 3.1e-32 | 14-170 |
IPR020849 | Small GTPase superfamily, Ras type | |||
Molecular Function | GO:0003924 | GTPase activity | ||
Molecular Function | GO:0005525 | GTP binding | ||
Biological Process | GO:0006184 | GTP catabolic process | ||
Biological Process | GO:0007165 | signal transduction | ||
Cellular Component | GO:0016020 | membrane | ||
HMMSmart | SM00173 | Ras | 4.8e-36 | 17-180 |
IPR024156 | Small GTPase superfamily, ARF type | |||
Molecular Function | GO:0005525 | GTP binding | ||
Cellular Component | GO:0005622 | intracellular | ||
Biological Process | GO:0007264 | small GTPase mediated signal transduction | ||
HMMSmart | SM00177 | ARF-like | 0.0038 | 1-181 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
superfamily | SSF52540 | P-loop | 8.2e-70 | 11-214 |
no_ID | ||||
Gene3D | G3DSA:3.40.50.300 | no description | 8.4e-78 | 8-214 |
HMMPanther | PTHR24073 | FAMILY | 2.2e-163 | 1-216 |
HMMPanther | PTHR24073:SF56 | SUBFAMILY | 2.2e-163 | 1-216 |
ProfileScan | PS51419 | RAB | 38.587 | 11-214 |
Seg | seg | seg | NA | 2-14 35-52 200-216 |
Lj5g3v0614770.1 chlo 5, cyto 5, mito 2, nucl 1, extr 1, cyto_mito 1, mito_plas 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v0614770.1 |