Miyakogusa Predicted Gene

Lj5g3v0586630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNF7_LOTJA 717 85.9 85.9 (tr|I3SNF7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G31420.1 474 56.9 71.7 | Symbols: | Zinc finger protein 622 | chr4:15245987-15247763 REVERSE LENGTH=404
Medicago Medtr1g009770.1 588 72.1 79.1 | C2H2-type zinc finger protein | HC | chr1:1509159-1512465 | 20130731
Soybean Glyma17g29490.1 613 72.9 79.5  
LJGI gnl|LJGI|TC72386 918 100.0 100.0 similar to UniRef100_A7P4Z0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0586630.1 length: 410 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 9.7 1-35
65-99
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 6-28
70-92
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 7.2 4-28
68-92
184-206
235-262
no_ID  
HMMPanther PTHR13182 ZINC 1.2e-87 1-404
HMMPfam PF12756 zf-C2H2_2 3.2e-25 6-102
186-287
Seg seg seg NA 130-146
161-182
267-284
superfamily SSF57667 C2H2 0.0011 169-285
53-98
1-50
Wolf-PSORT
Lj5g3v0586630.1	nucl 6, cysk 6, cysk_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0586630.1