Miyakogusa Predicted Gene
- Lj5g3v0553280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MWJ9_SOYBN |
858 |
85.8 |
92.2 |
(tr|I1MWJ9) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT4G31140.1 |
701 |
70.4 |
84.1 |
| Symbols: | O-Glycosyl hydrolases family 17 protein | chr4:15141581-15143188 FORWARD LENGTH=484 |
| Medicago |
Medtr1g010120.1 |
793 |
80.4 |
88.8 |
| glucan endo-1,3-beta-glucosidase-like protein | HC | chr1:1751260-1754940 | 20130731 |
| Soybean |
Glyma14g16830.1 |
858 |
85.6 |
92.4 |
|
| LJGI |
gnl|LJGI|TC68903 |
1263 |
100.0 |
100.0 |
similar to UniRef100_A7QA62 Cluster: Chromosome undetermined scaffold_69, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_69, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0553280.1 |
length: 486 aa. |
| IPR000490 |
Glycoside hydrolase, family 17 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00332 |
Glyco_hydro_17 |
5.7e-75 |
30-348 |
| PatternScan |
PS00587 |
GLYCOSYL_HYDROL_F17 |
NA |
264-277 |
| IPR012946 |
X8 |
| HMMPfam |
PF07983 |
X8 |
5.1e-13 |
368-436 |
| HMMSmart |
SM00768 |
Possibly |
5.7e-32 |
368-453 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
1.7e-113 |
30-348 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
7.4e-86 |
30-349 |
| no_ID |
|
| HMMPanther |
PTHR32227 |
FAMILY |
1.9e-276 |
13-481 |
| HMMPanther |
PTHR32227:SF25 |
SUBFAMILY |
1.9e-276 |
13-481 |
- Wolf-PSORT
Lj5g3v0553280.1 plas 8, vacu 4, nucl_plas 4, golg_plas 4, cysk_plas 4, E.R._plas 4, mito_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0553280.1 |
|