Miyakogusa Predicted Gene
- Lj5g3v0539830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M9K9_SOYBN |
679 |
88.0 |
95.1 |
(tr|I1M9K9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G11420.1 |
597 |
76.6 |
88.2 |
| Symbols: | Protein of unknown function, DUF642 | chr5:3644655-3646991 FORWARD LENGTH=366 |
| Medicago |
Medtr1g011800.1 |
656 |
87.8 |
95.7 |
| plant/F18G18-200 protein | HC | chr1:2282936-2288081 | 20130731 |
| Soybean |
Glyma14g15120.1 |
679 |
88.0 |
95.1 |
|
| LJGI |
gnl|LJGI|TC68232 |
995 |
100.0 |
100.0 |
similar to UniRef100_Q43557 Cluster: Unidentified precursor; n=1; Medicago sativa|Rep: Unidentified precursor - Medicago sativa (Alfalfa), partial (42%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0539830.1 |
length: 366 aa. |
| IPR006946 |
Protein of unknown function DUF642 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04862 |
DUF642 |
3.6e-158 |
45-362 |
| no_ID |
|
| HMMPanther |
PTHR31265 |
FAMILY |
8.2e-235 |
5-365 |
| HMMPanther |
PTHR31265:SF0 |
SUBFAMILY |
8.2e-235 |
5-365 |
- Wolf-PSORT
Lj5g3v0539830.1 chlo 5, cyto 3, extr 2, vacu 2, cyto_nucl 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0539830.1 |
|