Miyakogusa Predicted Gene

Lj5g3v0539820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q705X1_LOTJA 1729 94.3 94.3 (tr|Q705X1) Cysteine-rich polycomb-like protein OS=Lotus japonicus GN=cpp1 PE=2 SV=1
TAIR_pep AT4G14770.1 213 41.7 54.0 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 | chr4:8481522-8484825 REVERSE LENGTH=674
Medicago Medtr1g012020.1 809 53.1 63.0 | cysteine-rich polycomb-like protein | HC | chr1:2319368-2312974 | 20130731
Soybean Glyma14g14750.1 766 51.5 61.9  
LJGI gnl|LJGI|TC57124 5331 99.9 99.9 UniRef100_Q705X1 Cluster: Cysteine-rich polycomb-like protein; n=1; Lotus japonicus|Rep: Cysteine-rich polycomb-like protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0539820.1 length: 897 aa.
IPR005172 CRC domain
method AccNumber shortName E-value location
HMMPfam PF03638 CXC 5.2e-13 508-546
594-631
ProfileScan PS51634 CRC 35.248 507-633
no_ID  
HMMPanther PTHR12446 TESMIN/TSO1-RELATED 1.7e-88 286-674
HMMPanther PTHR12446:SF7 TESMIN/TSO1-LIKE 1.7e-88 286-674
Seg seg seg NA 13-22
26-37
207-218
494-502
849-855
Wolf-PSORT
Lj5g3v0539820.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0539820.1