Miyakogusa Predicted Gene

Lj5g3v0529120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MN49_SOYBN 742 58.9 65.4 (tr|K7MN49) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25290.3 597 62.9 77.0 | Symbols: Phox1 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | chr2:10766192-10768517 REVERSE LENGTH=745
Medicago Medtr1g012840.1 773 80.8 88.3 | octicosapeptide/phox/Bem1p domain protein | HC | chr1:2677409-2672037 | 20130731
Soybean Glyma04g06890.1 653 67.7 79.7  
LJGI gnl|LJGI|TC59678 1919 97.9 97.9 similar to UniRef100_A7P620 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0529120.1 length: 718 aa.
IPR000270 Phox/Bem1p
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00564 PB1 2.1e-15 269-346
HMMSmart SM00666 PB1 1.6e-17 269-347
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.9e-26 483-512
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 6.903 57-164
477-510
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 19 57-90
95-130
131-164
477-510
ProfileScan PS50005 TPR 6.225 57-90
97-130
131-164
477-510
no_ID  
Coil coil coiled-coil NA 486-507
Gene3D G3DSA:3.10.20.240 no description 5e-10 262-334
HMMPanther PTHR22904 TPR 2.8e-213 47-687
HMMPanther PTHR22904:SF25 TPR 2.8e-213 47-687
HMMPfam PF13414 TPR_11 1.2e-15 57-128
Seg seg seg NA 20-25
34-51
205-219
226-266
491-503
602-607
superfamily SSF48452 TPR-like 0.00019 42-220
417-536
superfamily SSF54277 CAD 1.2e-15 270-362
Wolf-PSORT
Lj5g3v0529120.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0529120.1