Miyakogusa Predicted Gene

Lj5g3v0510890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T9E4_LOTJA 298 92.5 92.5 (tr|I3T9E4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G07750.2 249 74.2 88.1 | Symbols: | 3'-5'-exoribonuclease family protein | chr3:2473486-2475218 FORWARD LENGTH=286
Medicago Medtr1g031820.1 271 82.5 90.0 | exosome complex exonuclease RRP41 | HC | chr1:11167445-11172254 | 20130731
Soybean Glyma16g26780.1 277 86.2 90.0  
LJGI gnl|LJGI|TC60419 997 96.6 96.6 similar to UniRef100_A7P612 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0510890.1 length: 180 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
HMMPfam PF01138 RNase_PH 3.9e-24 30-159
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 6.3e-25 20-159
IPR027408 PNPase/RNase PH domain
Gene3D G3DSA:3.30.230.70 no description 2.8e-07 15-63
no_ID  
HMMPanther PTHR11097 EXOSOME 1.6e-64 1-161
HMMPanther PTHR11097:SF5 EXOSOME 1.6e-64 1-161
Seg seg seg NA 110-121
Wolf-PSORT
Lj5g3v0510890.1	cyto 6, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0510890.1