Miyakogusa Predicted Gene

Lj5g3v0471500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MX24_SOYBN 1050 71.8 80.3 (tr|I1MX24) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G24640.1 669 64.6 76.4 | Symbols: UBP19 | ubiquitin-specific protease 19 | chr2:10475613-10479341 REVERSE LENGTH=672
Medicago Medtr1g014680.1 925 78.0 84.5 | ubiquitin carboxy-terminal hydrolase | HC | chr1:3486908-3492992 | 20130731
Soybean Glyma14g12360.1 1040 71.9 80.6  
LJGI gnl|LJGI|TC70768 1074 99.1 99.1 similar to UniRef100_A7QJQ5 Cluster: Chromosome undetermined scaffold_107, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_107, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0471500.1 length: 719 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.3e-50 172-476
ProfileScan PS50235 UCH_2_3 26.971 173-480
IPR002893 Zinc finger, MYND-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01753 zf-MYND 5.6e-09 62-99
PatternScan PS01360 ZF_MYND_1 NA 62-99
ProfileScan PS50865 ZF_MYND_2 12.069 62-99
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 174-189
no_ID  
Gene3D G3DSA:2.20.210.10 no description 4.4e-08 300-367
HMMPanther PTHR24006 FAMILY 2.1e-185 79-689
HMMPanther PTHR24006:SF85 SUBFAMILY 2.1e-185 79-689
superfamily SSF144232 HIT/MYND 9.5e-14 52-109
superfamily SSF54001 Cysteine 4.7e-85 167-480
Wolf-PSORT
Lj5g3v0471500.1	nucl 3, extr 3, vacu 3, chlo 2, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0471500.1