Miyakogusa Predicted Gene

Lj5g3v0471400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MNB0_SOYBN 455 84.0 90.5 (tr|K7MNB0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G20910.1 320 61.1 73.3 | Symbols: AIP2 | RING/U-box superfamily protein | chr5:7092663-7094310 REVERSE LENGTH=310
Medicago Medtr1g014710.1 428 78.6 85.5 | RING-finger ubiquitin ligase | HC | chr1:3505741-3509683 | 20130731
Soybean Glyma17g33630.1 455 84.0 90.5  
LJGI gnl|LJGI|TC65261 1338 100.0 100.0 similar to UniRef100_A7P4W9 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0471400.1 length: 285 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.8e-14 233-275
HMMSmart SM00184 Ring 2.9e-06 234-274
ProfileScan PS50089 ZF_RING_2 12.622 234-275
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.2e-16 230-283
no_ID  
Coil coil coiled-coil NA 7-28
HMMPanther PTHR22763 RING 1.5e-33 204-285
Seg seg seg NA 4-25
149-159
superfamily SSF57850 RING/U-box 8.9e-20 211-281
Wolf-PSORT
Lj5g3v0471400.1	cyto 5, mito 4, chlo 2, nucl 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0471400.1