Miyakogusa Predicted Gene

Lj5g3v0465910.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7M5Y9_SOYBN 199 37.9 45.9 (tr|K7M5Y9) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G54200.1 86.7 32.1 45.9 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). | chr1:20235855-20236955 FORWARD LENGTH=366

Medicago Medtr3g104880.1 163 34.0 42.4 | hypothetical protein | HC | chr3:48344321-48345675 | 20130731

Soybean Glyma17g34260.1 198 38.4 48.2

LJGI gnl|LJGI|TC79224 385 99.0 99.0 similar to UniRef100_A7P4R7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v0465910.1 length: 367 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 47-52
97-120
206-211
222-242
267-276
309-328

Wolf-PSORT

Lj5g3v0465910.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v0465910.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7M5Y9_SOYBN	199	37.9	45.9	(tr\|K7M5Y9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G54200.1	86.7	32.1	45.9	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). \| chr1:20235855-20236955 FORWARD LENGTH=366
Medicago	Medtr3g104880.1	163	34.0	42.4	\| hypothetical protein \| HC \| chr3:48344321-48345675 \| 20130731
Soybean	Glyma17g34260.1	198	38.4	48.2
LJGI	gnl\|LJGI\|TC79224	385	99.0	99.0	similar to UniRef100_A7P4R7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

no_ID
Lj5g3v0465910.1				length: 367 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	47-52 97-120 206-211 222-242 267-276 309-328