Miyakogusa Predicted Gene

Lj5g3v0455900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9IKC9_POPTR 344 67.3 70.8 (tr|B9IKC9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_668840 PE=2 SV=1
TAIR_pep AT3G42790.1 312 60.1 69.0 | Symbols: AL3 | alfin-like 3 | chr3:14878128-14879618 REVERSE LENGTH=250
Medicago Medtr1g015185.1 332 66.0 69.9 | PHD finger alfin-like protein | HC | chr1:3751255-3746618 | 20130731
Soybean Glyma14g11400.1 344 68.9 72.4  
LJGI gnl|LJGI|TC57893 1015 99.6 99.6 homologue to UniRef100_A7P4R4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0455900.1 length: 256 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 2.4e-09 202-250
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 1.1e-15 190-256
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3e-17 195-253
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 203-249
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 3.6e-10 203-252
ProfileScan PS50016 ZF_PHD_2 9.570 200-252
IPR021998 Protein of unknown function DUF3594
HMMPfam PF12165 DUF3594 3.4e-83 9-145
no_ID  
HMMPanther PTHR12321 CPG 6.2e-161 1-255
HMMPanther PTHR12321:SF12 SUBFAMILY 6.2e-161 1-255
Seg seg seg NA 58-75
145-161
176-200
Wolf-PSORT
Lj5g3v0455900.1	chlo 9, mito 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0455900.1