Miyakogusa Predicted Gene

Lj5g3v0404820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M5W0_SOYBN 267 54.3 59.9 (tr|K7M5W0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G26150.1 89.4 38.6 49.7 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive gata factor 1 | chr4:13253210-13254659 FORWARD LENGTH=352
Medicago Medtr1g016170.1 157 39.5 46.2 | GATA zinc finger protein | HC | chr1:4240718-4238422 | 20130731
Soybean Glyma17g34670.1 251 52.6 58.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0404820.1 length: 310 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 3e-16 175-208
HMMSmart SM00401 zinc 4.9e-17 169-220
PatternScan PS00344 GATA_ZN_FINGER_1 NA 175-200
ProfileScan PS50114 GATA_ZN_FINGER_2 13.125 169-205
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 1.8e-14 173-208
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 5e-17 102-209
HMMPanther PTHR10071:SF125SUBFAMILY NOT 5e-17 102-209
Seg seg seg NA 64-70
117-129
155-173
248-261
superfamily SSF57716 Glucocorticoid 2e-14 169-233
Wolf-PSORT
Lj5g3v0404820.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0404820.1