Miyakogusa Predicted Gene

Lj5g3v0391520.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SNF1_LOTJA 505 83.6 83.6 (tr|I3SNF1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G11810.1 244 43.4 58.6 | Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3808739-3810440 FORWARD LENGTH=306

Medicago Medtr1g016410.1 368 60.5 70.5 | Myo28B1, putative | HC | chr1:4359856-4357284 | 20130731

Soybean Glyma17g34750.1 379 65.2 72.5

LJGI gnl|LJGI|TC71521 1820 100.0 100.0 similar to UniRef100_A7P4N2 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v0391520.1 length: 304 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 23-35
39-50
66-77
223-234

Wolf-PSORT

Lj5g3v0391520.1 nucl 7, nucl_plas 5, chlo 3, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v0391520.1 Not targeted -48.638 -10.434 -0.969 71.91% -37.235

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SNF1_LOTJA	505	83.6	83.6	(tr\|I3SNF1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G11810.1	244	43.4	58.6	\| Symbols: \| unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:3808739-3810440 FORWARD LENGTH=306
Medicago	Medtr1g016410.1	368	60.5	70.5	\| Myo28B1, putative \| HC \| chr1:4359856-4357284 \| 20130731
Soybean	Glyma17g34750.1	379	65.2	72.5
LJGI	gnl\|LJGI\|TC71521	1820	100.0	100.0	similar to UniRef100_A7P4N2 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

no_ID
Lj5g3v0391520.1				length: 304 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	23-35 39-50 66-77 223-234