Miyakogusa Predicted Gene
- Lj5g3v0381140.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T7K8_SOYBN |
373 |
85.3 |
88.6 |
(tr|C6T7K8) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G56750.1 |
330 |
73.9 |
83.9 |
| Symbols: NDL1 | N-MYC downregulated-like 1 | chr5:22957986-22960606 FORWARD LENGTH=346 |
| Medicago |
Medtr1g016510.1 |
363 |
81.5 |
87.2 |
| pollen-specific SF21-like protein | HC | chr1:4421553-4416255 | 20130731 |
| Soybean |
Glyma06g05420.1 |
373 |
85.3 |
88.6 |
|
| LJGI |
gnl|LJGI|TC58490 |
1078 |
100.0 |
100.0 |
similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0381140.2 |
length: 212 aa. |
| IPR004142 |
Ndr |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11034 |
N-MYC |
9.3e-151 |
1-211 |
| HMMPfam |
PF03096 |
Ndr |
4.7e-68 |
1-185 |
| IPR015511 |
Pollen specific protein SF21 |
| HMMPanther |
PTHR11034:SF3 |
POLLEN |
9.3e-151 |
1-211 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
1.8e-50 |
1-180 |
| Seg |
seg |
seg |
NA |
185-200 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
7e-16 |
3-178 |
- Wolf-PSORT
Lj5g3v0381140.2 chlo 7, extr 4, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0381140.2 |
|