Miyakogusa Predicted Gene
- Lj5g3v0380130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T7K8_SOYBN |
140 |
90.7 |
97.3 |
(tr|C6T7K8) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G56750.1 |
127 |
87.5 |
91.7 |
| Symbols: NDL1 | N-MYC downregulated-like 1 | chr5:22957986-22960606 FORWARD LENGTH=346 |
| Medicago |
Medtr1g016510.1 |
135 |
86.7 |
94.7 |
| pollen-specific SF21-like protein | HC | chr1:4421553-4416255 | 20130731 |
| Soybean |
Glyma06g05420.1 |
140 |
90.7 |
97.3 |
|
| LJGI |
gnl|LJGI|TC66897 |
256 |
89.3 |
89.3 |
similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0380130.1 |
length: 79 aa. |
| IPR004142 |
Ndr |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11034 |
N-MYC |
1.2e-45 |
7-79 |
| HMMPfam |
PF03096 |
Ndr |
5.2e-09 |
5-37 |
| IPR015511 |
Pollen specific protein SF21 |
| HMMPanther |
PTHR11034:SF3 |
POLLEN |
1.2e-45 |
7-79 |
- Wolf-PSORT
Lj5g3v0380130.1 nucl 6, chlo 4, extr 3, cyto_nucl 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0380130.1 |
|