Miyakogusa Predicted Gene
- Lj5g3v0380120.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M910_SOYBN |
598 |
92.3 |
96.5 |
(tr|I1M910) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G11790.1 |
499 |
76.5 |
87.1 |
| Symbols: NDL2 | N-MYC downregulated-like 2 | chr5:3799682-3802496 FORWARD LENGTH=344 |
| Medicago |
Medtr1g016510.1 |
591 |
91.0 |
95.2 |
| pollen-specific SF21-like protein | HC | chr1:4421553-4416255 | 20130731 |
| Soybean |
Glyma14g10720.1 |
598 |
92.3 |
96.5 |
|
| LJGI |
gnl|LJGI|TC58490 |
775 |
86.7 |
86.7 |
similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0380120.1 |
length: 332 aa. |
| IPR004142 |
Ndr |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11034 |
N-MYC |
9.7e-226 |
6-332 |
| HMMPfam |
PF03096 |
Ndr |
2.4e-108 |
23-307 |
| IPR015511 |
Pollen specific protein SF21 |
| HMMPanther |
PTHR11034:SF3 |
POLLEN |
9.7e-226 |
6-332 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
2.1e-89 |
13-302 |
| Seg |
seg |
seg |
NA |
3-21 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
1.3e-27 |
20-300 |
- Wolf-PSORT
Lj5g3v0380120.1 chlo 4, nucl 3.5, cysk_nucl 2.5, E.R. 2, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0380120.1 |
|