Miyakogusa Predicted Gene

Lj5g3v0380100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2HTC4_MEDTR 757 84.6 90.2 (tr|Q2HTC4) Conserved oligomeric Golgi complex component 4, related OS=Medicago truncatula GN=MTR_7g118220 PE=4 SV=1
TAIR_pep AT4G01400.2 636 72.9 84.7 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167); Has 465 Blast hits to 425 proteins in 199 species: Archae - 0; Bacteria - 3; Metazoa - 153; Fungi - 166; Plants - 45; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). | chr4:573098-575648 REVERSE LENGTH=738
Medicago Medtr7g118220.1 757 84.6 90.2 | component of oligomeric protein | HC | chr7:49069047-49065741 | 20130731
Soybean Glyma03g42200.1 751 82.9 90.1  
LJGI gnl|LJGI|TC81628 1471 99.0 99.0 homologue to UniRef100_Q2HTC4 Cluster: Conserved oligomeric Golgi complex component 4, related; n=1; Medicago truncatula|Rep: Conserved oligomeric Golgi complex component 4, related - Medicago truncatula (Barrel medic), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0380100.1 length: 449 aa.
IPR013167 Conserved oligomeric Golgi complex, subunit 4
method AccNumber shortName E-value location
HMMPfam PF08318 COG4 4.3e-64 190-449
HMMSmart SM00762 COG4 2.6e-72 188-449
no_ID  
Coil coil coiled-coil NA 67-88
HMMPanther PTHR24016 FAMILY 1.4e-180 24-447
HMMPanther PTHR24016:SF0 SUBFAMILY 1.4e-180 24-447
Wolf-PSORT
Lj5g3v0380100.1	nucl 4, cyto 4, cyto_nucl 4, chlo 3, nucl_plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0380100.1