Miyakogusa Predicted Gene
- Lj5g3v0380040.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SRC7_LOTJA |
424 |
96.3 |
97.2 |
(tr|I3SRC7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G26010.1 |
152 |
45.0 |
61.1 |
| Symbols: | Protein phosphatase 2C family protein | chr5:9085512-9087372 REVERSE LENGTH=331 |
| Medicago |
Medtr1g016620.1 |
300 |
72.6 |
83.2 |
| protein phosphatase 2C-like protein | HC | chr1:4473372-4477359 | 20130731 |
| Soybean |
Glyma17g34880.1 |
289 |
69.0 |
81.5 |
|
| LJGI |
gnl|LJGI|TC80598 |
1209 |
99.5 |
99.5 |
similar to UniRef100_A7P4H7 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0380040.1 |
length: 214 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
8.3e-32 |
34-208 |
| HMMPfam |
PF00481 |
PP2C |
1.7e-13 |
50-206 |
| HMMSmart |
SM00332 |
Serine/threonine |
4.6e-05 |
30-214 |
| superfamily |
SSF81606 |
PP2C-like |
8.5e-25 |
18-212 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
7.9e-58 |
30-209 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF193PUTATIVE |
UNCHARACTERIZED |
7.9e-58 |
30-209 |
- Wolf-PSORT
Lj5g3v0380040.1 nucl 5, cyto 4, extr 3, cysk 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0380040.1 |
|