Miyakogusa Predicted Gene

Lj5g3v0369990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J535_MEDTR 1078 77.2 83.0 (tr|G7J535) MscS family inner membrane protein ynaI OS=Medicago truncatula GN=MTR_3g100280 PE=4 SV=1
TAIR_pep AT1G58200.2 665 50.6 66.6 | Symbols: MSL3 | MSCS-like 3 | chr1:21548370-21552488 REVERSE LENGTH=678
Medicago Medtr3g100280.1 1078 77.2 83.0 | mechanosensitive ion channel-like protein | HC | chr3:46094703-46102000 | 20130731
Soybean Glyma04g10060.2 1074 76.7 82.5  
LJGI gnl|LJGI|FS335612 1013 98.7 98.7 similar to UniRef100_A7NUM4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0369990.1 length: 701 aa.
IPR006685 Mechanosensitive ion channel MscS
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00924 MS_channel 2.5e-29 241-449
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 5.2e-11 283-354
no_ID  
Gene3D G3DSA:2.30.30.60 no description 1.8e-05 299-352
HMMPanther PTHR32210 FAMILY 3.5e-193 1-671
HMMPanther PTHR32210:SF0 SUBFAMILY 3.5e-193 1-671
Seg seg seg NA 242-253
267-281
Wolf-PSORT
Lj5g3v0369990.1	nucl 5, chlo 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0369990.1