Miyakogusa Predicted Gene

Lj5g3v0348750.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MXE7_SOYBN 533 83.1 89.8 (tr|I1MXE7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25910.1 470 73.1 85.6 | Symbols: | 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | chr2:11049379-11051997 REVERSE LENGTH=341
Medicago Medtr1g016970.1 511 78.8 88.7 | 3'-5' exonuclease | HC | chr1:4575701-4582988 | 20130731
Soybean Glyma17g34990.3 533 83.1 89.8  
LJGI gnl|LJGI|TC70766 1861 99.8 99.8 similar to UniRef100_A7P6W2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0348750.2 length: 332 aa.
IPR002562 3'-5' exonuclease domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Biological Process GO:0006139 nucleobase-containing compound metabolic process    
Molecular Function GO:0008408 3'-5' exonuclease activity    
HMMPfam PF01612 DNA_pol_A_exo1 9.9e-25 53-221
HMMSmart SM00474 3'-5' 3.1e-27 35-222
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 7.2e-09 275-323
ProfileScan PS50084 KH_TYPE_1 9.645 270-306
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 2.2e-39 29-254
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 4.2e-08 267-323
Gene3D G3DSA:3.30.420.10 no description 1.2e-14 52-229
HMMPanther PTHR12124 POLYMYOSITIS/SCLERODERMA 2.5e-55 30-249
Seg seg seg NA 2-13
superfamily SSF54791 Eukaryotic 1.4e-08 258-327
Wolf-PSORT
Lj5g3v0348750.2	cyto 7, cysk 4, nucl 2, cysk_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0348750.2