Miyakogusa Predicted Gene

Lj5g3v0322430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M5R6_SOYBN 1176 62.6 66.1 (tr|K7M5R6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G44910.1 673 49.4 62.1 | Symbols: ATPRP40A, PRP40A | pre-mRNA-processing protein 40A | chr1:16975930-16982818 FORWARD LENGTH=958
Medicago Medtr1g017520.1 1140 61.9 67.6 | pre-mRNA-processing 40A-like protein | HC | chr1:4919114-4935894 | 20130731
Soybean Glyma17g35120.1 1073 60.0 63.3  
LJGI gnl|LJGI|TC68968 1955 99.5 99.5 similar to UniRef100_A7NUC3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0322430.1 length: 999 aa.
IPR001202 WW domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00397 WW 6.4e-08 196-223
239-264
HMMSmart SM00456 Domain 8.1e-08 193-225
234-266
PatternScan PS01159 WW_DOMAIN_1 NA 198-223
239-264
ProfileScan PS50020 WW_DOMAIN_2 12.728 192-225
233-266
superfamily SSF51045 WW 1e-10 196-233
237-274
IPR002713 FF domain
Gene3D G3DSA:1.10.10.440 no description 9.6e-10 430-491
492-558
560-626
635-705
765-833
HMMPfam PF01846 FF 0.00012 436-485
503-553
572-620
645-700
781-828
HMMSmart SM00441 Contains 3 434-488
501-556
569-623
643-704
776-831
superfamily SSF81698 FF 6.5e-06 423-491
501-563
776-838
569-630
643-711
IPR027237 Pre-mRNA-processing protein PRP40
HMMPanther PTHR11864:SF0 PRE-MRNA-PROCESSING 3.6e-275 1-999
no_ID  
Coil coil coiled-coil NA 482-506
550-580
617-638
758-783
829-881
Gene3D G3DSA:2.20.70.10 no description 9e-14 197-226
239-268
HMMPanther PTHR11864 PRE-MRNA-PROCESSING 3.6e-275 1-999
Seg seg seg NA 11-33
50-62
158-173
286-320
556-571
597-615
725-730
754-780
833-885
900-916
918-938
976-989
Wolf-PSORT
Lj5g3v0322430.1	nucl 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0322430.1