database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I3SQF3_LOTJA | 405 | 100.0 | 100.0 | (tr|I3SQF3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep | AT1G10200.1 | 332 | 86.7 | 92.2 | | Symbols: WLIM1 | GATA type zinc finger transcription factor family protein | chr1:3346677-3347763 REVERSE LENGTH=190 |
Medicago | Medtr1g017950.1 | 380 | 92.3 | 96.9 | | GATA type zinc finger transcription factor family protein | HC | chr1:5125381-5123274 | 20130731 |
Soybean | Glyma17g35290.1 | 377 | 92.3 | 97.9 | |
LJGI | gnl|LJGI|TC58048 | 1172 | 100.0 | 100.0 | similar to UniRef100_Q59HI2 Cluster: Transcription factor lim1; n=2; Eucalyptus|Rep: Transcription factor lim1 - Eucalyptus camaldulensis (River red gum), partial (96%) |
Lj5g3v0310290.2 | length: 195 aa. | |||
IPR001781 | Zinc finger, LIM-type | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0008270 | zinc ion binding | ||
Gene3D | G3DSA:2.10.110.10 | no description | 1.9e-22 | 3-70 104-171 |
HMMPfam | PF00412 | LIM | 2.3e-15 | 10-64 110-164 |
HMMSmart | SM00132 | Zinc-binding | 7.4e-15 | 9-61 109-161 |
PatternScan | PS00478 | LIM_DOMAIN_1 | NA | 10-44 |
ProfileScan | PS50023 | LIM_DOMAIN_2 | 12.504 | 8-68 108-168 |
no_ID | ||||
HMMPanther | PTHR24206 | FAMILY | 5e-21 | 10-67 |
HMMPanther | PTHR24206:SF0 | SUBFAMILY | 5e-21 | 10-67 |
superfamily | SSF57716 | Glucocorticoid | 8.7e-14 | 36-77 136-177 100-135 1-35 |
Lj5g3v0310290.2 chlo 8, cyto 3, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v0310290.2 |