Miyakogusa Predicted Gene

Lj5g3v0310290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQF3_LOTJA 405 100.0 100.0 (tr|I3SQF3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G10200.1 332 86.7 92.2 | Symbols: WLIM1 | GATA type zinc finger transcription factor family protein | chr1:3346677-3347763 REVERSE LENGTH=190
Medicago Medtr1g017950.1 380 92.3 96.9 | GATA type zinc finger transcription factor family protein | HC | chr1:5125381-5123274 | 20130731
Soybean Glyma17g35290.1 377 92.3 97.9  
LJGI gnl|LJGI|TC58048 1172 100.0 100.0 similar to UniRef100_Q59HI2 Cluster: Transcription factor lim1; n=2; Eucalyptus|Rep: Transcription factor lim1 - Eucalyptus camaldulensis (River red gum), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0310290.1 length: 195 aa.
IPR001781 Zinc finger, LIM-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:2.10.110.10 no description 1.9e-22 3-70
104-171
HMMPfam PF00412 LIM 2.3e-15 10-64
110-164
HMMSmart SM00132 Zinc-binding 7.4e-15 9-61
109-161
PatternScan PS00478 LIM_DOMAIN_1 NA 10-44
ProfileScan PS50023 LIM_DOMAIN_2 12.504 8-68
108-168
no_ID  
HMMPanther PTHR24206 FAMILY 5e-21 10-67
HMMPanther PTHR24206:SF0 SUBFAMILY 5e-21 10-67
superfamily SSF57716 Glucocorticoid 8.7e-14 36-77
136-177
100-135
1-35
Wolf-PSORT
Lj5g3v0310290.1	chlo 8, cyto 3, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0310290.1