Miyakogusa Predicted Gene

Lj5g3v0310180.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M5Q3_SOYBN 1213 82.7 90.2 (tr|K7M5Q3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G27460.1 824 57.4 74.2 | Symbols: NPGR1 | no pollen germination related 1 | chr1:9534977-9537424 FORWARD LENGTH=694
Medicago Medtr1g018040.1 1187 80.0 89.2 | TPR 7B-like protein | HC | chr1:5167903-5162771 | 20130731
Soybean Glyma14g09840.1 1213 82.7 90.2  
LJGI gnl|LJGI|FS354559 1104 99.8 99.8 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0310180.2 length: 720 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.3e-23 45-148
149-235
476-711
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 16.233 577-714
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 27 321-354
515-548
611-644
681-714
ProfileScan PS50005 TPR 6.874 321-354
611-644
681-714
no_ID  
Coil coil coiled-coil NA 58-79
HMMPanther PTHR23083 TETRATRICOPEPTIDE 8e-188 59-718
HMMPanther PTHR23083:SF163SUBFAMILY NOT 8e-188 59-718
Seg seg seg NA 268-274
superfamily SSF48452 TPR-like 1.3e-06 565-717
304-539
63-473
Wolf-PSORT
Lj5g3v0310180.2	nucl 5, cyto 5, cyto_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0310180.2