Miyakogusa Predicted Gene
- Lj5g3v0310140.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7ICD6_MEDTR |
433 |
79.2 |
91.0 |
(tr|G7ICD6) Sigma factor sigB regulation protein rsbQ OS=Medicago truncatula GN=MTR_1g018320 PE=4 SV=1 |
| TAIR_pep |
AT3G03990.1 |
386 |
72.0 |
84.8 |
| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:1033788-1034591 FORWARD LENGTH=267 |
| Medicago |
Medtr1g018320.1 |
433 |
79.2 |
91.0 |
| sigma factor sigb regulation rsbq-like protein | HC | chr1:5202292-5203901 | 20130731 |
| Soybean |
Glyma17g35360.1 |
426 |
76.5 |
89.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0310140.4 |
length: 268 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
1.7e-49 |
10-261 |
| HMMPanther |
PTHR10992 |
ALPHA/BETA |
2.2e-121 |
10-265 |
| HMMPanther |
PTHR10992:SF13 |
SIGMA |
2.2e-121 |
10-265 |
| HMMPfam |
PF12697 |
Abhydrolase_6 |
1.1e-32 |
21-258 |
| Seg |
seg |
seg |
NA |
256-268 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
5.6e-36 |
17-261 |
- Wolf-PSORT
Lj5g3v0310140.4 cyto 7, chlo 2, cysk 2, plas 1, golg 1, chlo_mito 1, cysk_nucl 1, golg_plas 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0310140.4 |
Not targeted |
-62.700 |
-19.052 |
-6.233 |
91.25% |
-37.415
|