Miyakogusa Predicted Gene
- Lj5g3v0309110.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T533_LOTJA |
154 |
100.0 |
100.0 |
(tr|I3T533) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G31170.2 |
141 |
87.7 |
95.9 |
| Symbols: ATSRX, SRX | sulfiredoxin | chr1:11133521-11134228 FORWARD LENGTH=125 |
| Medicago |
Medtr4g084180.1 |
146 |
91.8 |
97.3 |
| sulfiredoxin | HC | chr4:32811582-32809890 | 20130731 |
| Soybean |
Glyma20g02350.3 |
148 |
95.9 |
95.9 |
|
| LJGI |
gnl|LJGI|GO036538 |
446 |
100.0 |
100.0 |
similar to UniRef100_Q2MGR0 Cluster: ParB-like nuclease; n=1; Medicago truncatula|Rep: ParB-like nuclease - Medicago truncatula (Barrel medic), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0309110.1 |
length: 73 aa. |
| IPR003115 |
ParB-like nuclease |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| HMMPfam |
PF02195 |
ParBc |
1.1e-14 |
4-67 |
| HMMSmart |
SM00470 |
ParB-like |
3.2e-07 |
1-68 |
| superfamily |
SSF110849 |
ParB/Sulfiredoxin |
1.2e-10 |
7-73 |
| IPR016692 |
Sulfiredoxin |
| Molecular Function |
GO:0032542 |
sulfiredoxin activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPIR |
PIRSF017267 |
Sulfiredoxin |
3.2e-07 |
1-73 |
| HMMPanther |
PTHR21348 |
UNCHARACTERIZED |
7.5e-30 |
4-73 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.1530.10 |
no description |
1.8e-10 |
6-67 |
- Wolf-PSORT
Lj5g3v0309110.1 nucl 4, cyto 4, cyto_nucl 4, mito 3, nucl_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0309110.1 |
|