Miyakogusa Predicted Gene

Lj5g3v0308860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3T0R7_MEDTR 404 64.4 68.2 (tr|I3T0R7) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT3G01400.1 377 62.3 67.4 | Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355
Medicago Medtr1g018180.1 410 65.3 69.1 | armadillo/beta-catenin-like repeat protein | HC | chr1:5221615-5219153 | 20130731
Soybean Glyma17g35390.1 404 70.0 74.9  
LJGI gnl|LJGI|TC72797 1491 100.0 100.0 similar to UniRef100_Q944I3 Cluster: AT3g01400/T13O15_4; n=1; Arabidopsis thaliana|Rep: AT3g01400/T13O15_4 - Arabidopsis thaliana (Mouse-ear cress), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0308860.1 length: 353 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 5.9e-05 92-130
132-171
175-213
HMMSmart SM00185 Armadillo/beta-catenin-like 2.8e+02 91-131
132-172
173-213
214-254
255-295
297-337
ProfileScan PS50176 ARM_REPEAT 11.672 102-144
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.1e-59 59-330
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.7e-43 61-335
no_ID  
HMMPanther PTHR23315 BETA 2.8e-190 1-349
HMMPanther PTHR23315:SF16 ANKYRIN 2.8e-190 1-349
Seg seg seg NA 12-35
58-79
107-119
244-278
343-353
Wolf-PSORT
Lj5g3v0308860.1	chlo 4, cyto 3, chlo_mito 3, mito 2, plas 2, pero 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0308860.1